The detailed information of tRNA gene sequence


Sequence ID>SRA1009491
Genome IDSRR020491.249260
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 138
End posion on genome 53
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ataaggtatg
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTTAAGGCGCACGCTTGGAAAGCGTGTGTAGGTTTTCCTACC
GAGGGTTCGAATCCCTCCCTCTCCGCtg
Downstream region at tRNA end position 
aaagttgaaa
Secondary structure (Cloverleaf model)
>SRA1009491	Ser	GGA
                   g      GCtg aaagttgaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TGTAGGTTTTCCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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