The detailed information of tRNA gene sequence


Sequence ID>SRA1009596
Genome IDSRR020491.289619
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 155
End posion on genome 79
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ctgacccagt
tRNA gene sequence 
CGGGGTGTAGCTCAGCCTGGTAGAGCACTGCCTTCGGGAGGCAGGGGCCGGAGGTTCGAA
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
tttagtcaag
Secondary structure (Cloverleaf model)
>SRA1009596	Pro	CGG
                   t      ACCA tttagtcaag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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