The detailed information of tRNA gene sequence


Sequence ID>W1810814720
Genome IDQSAM01000005
Search identical group
Phylum/ClassActinomycetota
SpeciesBifidobacterium longum AF11-41 [QSAM]
Start position on genome 24426
End posion on genome 24514
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgcgtaacgt
tRNA gene sequence 
GGAGTCATGCCTGAGTGGCCGATAGGGGCACCCTGCTAAGGTGTTAGTCGTGTAAACGGC
TCGAGGGTTCGAATCCCTCTGACTCCGCCg
Downstream region at tRNA end position 
attaaggttc
Secondary structure (Cloverleaf model)
>W1810814720	Ser	GCT
                   t      GCCg attaaggttc
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     C - G
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C C       G A G G G     C
    G       + | | |                 T T
    C       T A G G
      C G A        G     TAGTCGTGTAAACGGCTC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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