The detailed information of tRNA gene sequence


Sequence ID>SRA1009725
Genome IDSRR020491.336804
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 40
End posion on genome 114
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cccacaggat
tRNA gene sequence 
GGGCGCGTGGTGTAGGGGATATCATGCTGGCCTTCTAAGCCGGCGACCCGGGTTCGAATC
CTGGCGCGCCCACCA
Downstream region at tRNA end position 
ctctcattca
Secondary structure (Cloverleaf model)
>SRA1009725	Arg	TCT
                   t      ACCA ctctcattca
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T A
                    T     G G T C C     A
      G G A        G      | | + | |     G
    G       T G T G       C C G G G     C
    G         | | +                 T T
    A       T C A T
      T A          G     CGAC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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