The detailed information of tRNA gene sequence


Sequence ID>SRA1009733
Genome IDSRR020491.339419
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 235
End posion on genome 162
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tagtgttagg
tRNA gene sequence 
GGCGGCATAGCCAAGCGGTAAGGCAGAGGCCTGCAAAGCCTTGATCCCCGGTTCGAATCC
GGGTGCCGCCTCCA
Downstream region at tRNA end position 
acgtttctat
Secondary structure (Cloverleaf model)
>SRA1009733	Cys	GCA
                   g      TCCA acgtttctat
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G G G C C     A
        G A        A      | | | | |     G
      C     A C C G       C C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     GATC
                    G + T
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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