The detailed information of tRNA gene sequence


Sequence ID>SRA1009748
Genome IDSRR020491.345317
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 231
End posion on genome 135
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aaagaacaga
tRNA gene sequence 
GGGGGCGGAGGGGGACTGGTGTCTCCGGCGGTCTTCAAAACCGTGCGGCCCGGCTAGAAC
CCGGGTAGGTGGGTTCGATTCCCACACGTCCCCGCCA
Downstream region at tRNA end position 
cggcttcggc
Secondary structure (Cloverleaf model)
>SRA1009748	SeC	TCA
                   a      GCCA cggcttcggc
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     G   A          T T
                    A     C A C C C     A
      T C A        G      | | | | |     G
    G       G G G G       G T G G G     C
    G       | + | |                 T T
    T       C T C C
      G T          G     GCGGCCCGGCTAGAACCCGGGTAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK