The detailed information of tRNA gene sequence


Sequence ID>SRA1009836
Genome IDSRR020491.371596
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 100
End posion on genome 174
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
attatataat
tRNA gene sequence 
GCCCTCGTAGCTCAATAGGATAGAGCGTTCGCCTCCTAAGCGAAAGGCTTCCCGTTCGAT
TCGGGACGAGGGTACtg
Downstream region at tRNA end position 
gcagtaaaat
Secondary structure (Cloverleaf model)
>SRA1009836	Arg	CCT
                   t      ACtg gcagtaaaat
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     A G G G C     A
      T A A        A      | | | | |     G
    A       C T C G       T C C C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGCT
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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