The detailed information of tRNA gene sequence


Sequence ID>SRA1010317
Genome IDSRR020492.9043
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 92
End posion on genome 189
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttaaattgat
tRNA gene sequence 
GGGAGTGGATGAGGCCCGGTGGTCTCTGCGGACTTCAAATCCGTTGGCTTTTACCCTTCG
GTAGAAGTGGTGGGTTCGACTCCCTCGCACTCCCGCCA
Downstream region at tRNA end position 
aaatgtctga
Secondary structure (Cloverleaf model)
>SRA1010317	SeC	TCA
                   t      GCCA aaatgtctga
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T C
                    A     C T C C C     A
      C C C        T      |   | | |     G
    G       G G A G       G T G G G     C
    G       + | | |                 T T
    T       T C T C
      G G          T     TGGCTTTTACCCTTCGGTAGAAGTG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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