The detailed information of tRNA gene sequence


Sequence ID>W1810884567
Genome IDQUMS01000001
Search identical group
Phylum/ClassChloroflexota
SpeciesPelolinea submarina DSM 23923 [QUMS]
Start position on genome 1601799
End posion on genome 1601711
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tagcagtcgt
tRNA gene sequence 
GGAGAGGTCGCGTAGTCCGGCTTAGCGCGCACGCTTGGAGAGCGTGTGTACCGTAAGGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCt
Downstream region at tRNA end position 
tttatttaag
Secondary structure (Cloverleaf model)
>W1810884567	Ser	GGA
                   t      GCCt tttatttaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        C      | | | | |     G
  C         T G C G       G T G G G     C
  G         + | | |                 T T
  G         G C G C
    C T T A        G     TGTACCGTAAGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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