The detailed information of tRNA gene sequence


Sequence ID>SRA1010816
Genome IDSRR020492.181864
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 272
End posion on genome 196
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aaattttttg
tRNA gene sequence 
TGGGGCGTAGCTCAGTTGGTAGAGCGTCTGCCTTGCACGTAGAAGGTTCGCAGGTTCGAC
TCCTGTCGCCTCCACCA
Downstream region at tRNA end position 
caaaaaaata
Secondary structure (Cloverleaf model)
>SRA1010816	Ala	TGC
                   g      ACCA caaaaaaata
                     T   C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C          T C
                    T     T G T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTTC
                    T - A
                    C - G
                    T - A
                    G + T
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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