The detailed information of tRNA gene sequence


Sequence ID>SRA1010896
Genome IDSRR020492.207066
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 64
End posion on genome 140
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaaatttaa
tRNA gene sequence 
GGCGGAGTAGCTCAGTTGGTCAGAGCAGAGGAATCATAATCCTTGTGTCGGGGGTTCAAA
TCCCTCCTCCGCTACCA
Downstream region at tRNA end position 
aattctttag
Secondary structure (Cloverleaf model)
>SRA1010896	Met	CAT
                   a      ACCA aattctttag
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     GTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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