The detailed information of tRNA gene sequence


Sequence ID>SRA1010987
Genome IDSRR020492.240060
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 43
End posion on genome 115
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tatctgaggc
tRNA gene sequence 
GGCAACGTAGCTCAGTGGTTAGAGCGGGCGCTTCATAAGCGCTAGGTCACAGGTTCGAAC
CCTGTCGTTGCCAttc
Downstream region at tRNA end position 
cggcaatcga
Secondary structure (Cloverleaf model)
>SRA1010987	Met	CAT
                   c      Attc cggcaatcga
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T
                     C - G
                     G - C          C A
                    T     T G T C C     A
      T G A        A      | | | | |     G
    G       C T C G       A C A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     AGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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