The detailed information of tRNA gene sequence


Sequence ID>SRA1011371
Genome IDSRR020492.385195
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 226
End posion on genome 150
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cttaaattat
tRNA gene sequence 
GGCGAGATAGCTCAGTAGGTCAGAGCGTCGGATTCATAACCCGGAGGTCCCGAGTTCAAG
TCTCGGTCTCGCTACTA
Downstream region at tRNA end position 
ttcttctaat
Secondary structure (Cloverleaf model)
>SRA1011371	Met	CAT
                   t      ACTA ttcttctaat
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T G
                    T     G G C T C     A
      T G A        A      | | | | |     A
    A       C T C G       C C G A G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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