The detailed information of tRNA gene sequence


Sequence ID>SRA1011382
Genome IDSRR020492.388806
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 152
End posion on genome 62
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tccatcgctc
tRNA gene sequence 
TGGACAGGTGGCCGAGCGGCTGAAGGCACCGGTTTGCTAAACCGGCGTATCGGTTATACC
GGTACCGCGGGTTCGAATCCCGCCTGTCCGCttc
Downstream region at tRNA end position 
acgtctgcgc
Secondary structure (Cloverleaf model)
>SRA1011382	Ser	GCT
                   c      Cttc acgtctgcgc
                     T + G
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C          T A
                    G     C G C C C     A
    C G A G        T      | | | | |     G
  G         C C G G       G C G G G     C
  G           |   |                 T T
  C         A G G C
    T G A          A     CGTATCGGTTATACCGGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK