The detailed information of tRNA gene sequence


Sequence ID>SRA1011457
Genome IDSRR020492.418163
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 171
End posion on genome 248
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tgggagcgat
tRNA gene sequence 
GCACCGGTGCCCGAGCGGACCAAGGGAACGGCCTGCAAAGCCGTAAAGCCGCGGGTTCAA
ATCCCGCCCGGTGCTCGA
Downstream region at tRNA end position 
cgaatcgggc
Secondary structure (Cloverleaf model)
>SRA1011457	Cys	GCA
                   t      TCGA cgaatcgggc
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     A
    G       G C C C       G C G G G     C
    G         | | |                 T T
    A       A G G G
      C C A        A     AAAGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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