The detailed information of tRNA gene sequence


Sequence ID>PL201000036
Genome IDAP022566
Search identical group
Phylum/ClassActinomycetota
SpeciesMycolicibacterium alvei JCM 12272 plasmid:pJCM12272 [AP022566]
Start position on genome 18952
End posion on genome 18876
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ctaaacacgc
tRNA gene sequence 
TGCGCGGTAGGACAGTTCGGCAGTCCGCCGGGCTCATAACCCGGAAGTCGGTGGTTCAAA
TCCACCTCGCGCAACCA
Downstream region at tRNA end position 
gtagtagtcc
Secondary structure (Cloverleaf model)
>PL201000036	fMet	CAT
                   c      ACCA gtagtagtcc
                     T - A
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G + T          T A
                    T     C C A C C     A
      T G A        A      | | | | |     A
    T       C A G G       G G T G G     C
    C       | | | |                 T T
    G       G T C C
      G C A        G     AAGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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