The detailed information of tRNA gene sequence


Sequence ID>PL201000322
Genome IDCP031226
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudomonas amygdali pv. lachrymans str. M301315 plasmid:pMPPla107 [CP031226]
Start position on genome 909252
End posion on genome 909178
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gaagtagttt
tRNA gene sequence 
GCCCTATTCTTCTAGTGGTCAGGAATCCGCCCTTTCACGGCGGCAACAAGGGTTCGATTC
CCTTATAGGGCACCA
Downstream region at tRNA end position 
gttataggac
Secondary structure (Cloverleaf model)
>PL201000322	Glu	TTC
                   t      ACCA gttataggac
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     A - T
                     T - A          T T
                    T     T T C C C     A
      T G A        C      | | | | |     G
    G       T C T T       A A G G G     C
    G       + | | |                 T T
    T       G G A A
      C A          T     CAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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