The detailed information of tRNA gene sequence


Sequence ID>PL201000335
Genome IDCP031226
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudomonas amygdali pv. lachrymans str. M301315 plasmid:pMPPla107 [CP031226]
Start position on genome 708343
End posion on genome 708268
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aaagatatac
tRNA gene sequence 
GGGGTAGTAGCTCAGTTGGAAGAGCGCTTGCATGGCATGTAAGAGGTCGTCGGTTCGATC
CCGACCTGCTCCACCA
Downstream region at tRNA end position 
aatatgcatc
Secondary structure (Cloverleaf model)
>PL201000335	Ala	GGC
                   c      ACCA aatatgcatc
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     A - T
                     G - C          C T
                    T     C A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G + T
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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