The detailed information of tRNA gene sequence


Sequence ID>PL201000344
Genome IDCP031226
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudomonas amygdali pv. lachrymans str. M301315 plasmid:pMPPla107 [CP031226]
Start position on genome 652679
End posion on genome 652591
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gctttacctt
tRNA gene sequence 
GGATAGTTGCCGGAATCGGTCAACGGGCCGGCTTGGAAAGCCGGTGTTGCGCAAGCGACA
TAGGGGTTCGAGCCCCCTGCTATCCGCCA
Downstream region at tRNA end position 
gttttgggct
Secondary structure (Cloverleaf model)
>PL201000344	Ser	GGA
                   t      GCCA gttttgggct
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T
                     G - C
                     T + G          C G
                    T     T C C C C     A
      T A A        G      | | | | |     G
    C       G G C C       A G G G G     C
    G         | | |                 T T
    G       A C G G
      T C A        G     TGTTGCGCAAGCGACAT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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