The detailed information of tRNA gene sequence


Sequence ID>PL201000345
Genome IDCP031226
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudomonas amygdali pv. lachrymans str. M301315 plasmid:pMPPla107 [CP031226]
Start position on genome 652539
End posion on genome 652450
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aagtagtttt
tRNA gene sequence 
GGTGAAGTGGCCGAGTGGTCGAAGGCGCCTCCCTGCTAAGGAGGTATGTCAGCAATGGCA
TCGAGGGTTCAAATCCCTCCTTCACCGCCA
Downstream region at tRNA end position 
atacaggcaa
Secondary structure (Cloverleaf model)
>PL201000345	Ser	GCT
                   t      GCCA atacaggcaa
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATGTCAGCAATGGCATC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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