The detailed information of tRNA gene sequence


Sequence ID>PL201000554
Genome IDCP042620
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesEscherichia coli NCYU-26-73 plasmid:pNCYU-26-73-5 [CP042620]
Start position on genome 35840
End posion on genome 35926
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cacaatcact
tRNA gene sequence 
GGAGAGTAGGGAGCATGGTGCTCAAGCGGTCTTGAAAACCGTCCCATTGTGCAAACGATG
ATGGTTCGATTCCATTACTCTCCGCCA
Downstream region at tRNA end position 
gcgcaacgtt
Secondary structure (Cloverleaf model)
>PL201000554	Ser	TGA
                   t      GCCA gcgcaacgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T T
                    A     T T A C C     A
        A C        G      + | | | |     G
      T     G A G G       G A T G G     C
      G     | | |                   T T
      G     C T C A
        T G        A     CCCATTGTGCAAACGAT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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