The detailed information of tRNA gene sequence


Sequence ID>PL201000557
Genome IDCP042632
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesEscherichia coli NCYU-25-82 plasmid:pNCYU-25-82-5 [CP042632]
Start position on genome 59481
End posion on genome 59405
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ccggcacagt
tRNA gene sequence 
GGTGGTGTAGCTCAGTAGGATAGAGCAGCAGCCTTCTAAGCTGTCGGTCGGTGGTTCGAA
TCCACCCACCATCGCCA
Downstream region at tRNA end position 
attcagggga
Secondary structure (Cloverleaf model)
>PL201000557	Arg	TCT
                   t      GCCA attcagggga
                     G - C
                     G + T
                     T - A
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C C A C C     A
      T G A        A      | | | | |     G
    A       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     CGGTC
                    G + T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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