The detailed information of tRNA gene sequence


Sequence ID>PL201000803
Genome IDCP049030
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhodobacteraceae bacterium SC52 plasmid:pSC52_2 [CP049030]
Start position on genome 12995
End posion on genome 12919
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aaatatatga
tRNA gene sequence 
CGCGGGATGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTCAAA
TCCTACTCCCGCAACCA
Downstream region at tRNA end position 
aagtaataca
Secondary structure (Cloverleaf model)
>PL201000803	fMet	CAT
                   a      ACCA aagtaataca
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      C G A        G      | | | | |     A
    C       C G A G       G T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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