The detailed information of tRNA gene sequence


Sequence ID>PL201001225
Genome IDCP054710
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHalarchaeum sp. CBA1220 plasmid:pCBA1220-03 [CP054710]
Start position on genome 97831
End posion on genome 97907
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gtctatcgaT
tRNA gene sequence 
AGCGGGATAGGATAGCTCGGAGATTCCGCTGGGCTCATATCCCGGAGATCGGTGGTTCAA
ATCCACCTCCCGCTATtt
Downstream region at tRNA end position 
tgacactatt
Secondary structure (Cloverleaf model)
>PL201001225	fMet	CAT
                   T      ATtt tgacactatt
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C A C C     A
    T C G A        A      | | | | |     A
  C         T A G G       G G T G G     C
  G           | | |                 T T
  G         T T C C
    A G A          G     AGATC
                    C - G
                    T + G
                    G - C
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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