The detailed information of tRNA gene sequence


Sequence ID>PL201001436
Genome IDLR594660
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax sp. PBL-H6 plasmid:2 [LR594660]
Start position on genome 771718
End posion on genome 771792
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
accattcctc
tRNA gene sequence 
GCGCGACTAGCTCAGGGGTAGAGCGCTTGGTTGACATCCAAGAGGTCGGTGGTTCGAGAC
CACCGTCGCGTACCA
Downstream region at tRNA end position 
attcaccgga
Secondary structure (Cloverleaf model)
>PL201001436	Val	GAC
                   c      ACCA attcaccgga
                     G + T
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G          A G
                    T     C C A C C     A
        G A        A      | | | | |     G
      G     C T C G       G G T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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