The detailed information of tRNA gene sequence


Sequence ID>PL201001448
Genome IDLR594664
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax sp. RA8 plasmid:3 [LR594664]
Start position on genome 73311
End posion on genome 73233
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gtcaaaattc
tRNA gene sequence 
CGCGCGATGGGGGAGCCTGGTCGTCCCCGCGAGTTTCATACGCTCGAGATCGCCAGTTCA
AATCTGGCTCGCGCAACCA
Downstream region at tRNA end position 
atatcagccg
Secondary structure (Cloverleaf model)
>PL201001448	fMet	CAT
                   c      ACCA atatcagccg
                     C   A
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          T A
                    T     C G G T C     A
    C C G A        G      | | | | |     A
  T         G G G G       G C C A G     C
  G         | | | |                 T T
  G         C C C C
    T C G T        G     AGATC
                    C - G
                    G - C
                    A - T
                    G - C
                    T + G
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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