The detailed information of tRNA gene sequence


Sequence ID>PL201001453
Genome IDLR594664
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax sp. RA8 plasmid:3 [LR594664]
Start position on genome 72736
End posion on genome 72661
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aatcaacagg
tRNA gene sequence 
GCTCCGATAACTCAGCGGCGAGAGTGCCTCCCTGTCTAGGAGGAAGCCGGGGGTTCGATC
CCCCCTCGGAGCGCCA
Downstream region at tRNA end position 
acctcgcagc
Secondary structure (Cloverleaf model)
>PL201001453	Asp	GTC
                   g      GCCA acctcgcagc
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     A - T          C T
                    T     C C C C C     A
      C G A        A      | | | | |     G
    G       C T C A       G G G G G     C
    G       | | | |                 T T
    C       G A G T
      G A          G     AAGCC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       T
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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