The detailed information of tRNA gene sequence


Sequence ID>PL201001455
Genome IDLR594664
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax sp. RA8 plasmid:3 [LR594664]
Start position on genome 72349
End posion on genome 72258
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aacctcccct
tRNA gene sequence 
GGATGCGTGCCCGAGTGGTCTAAGGGCGCTGATTCGAAATCAGATGGATGGCGCAAGCCG
TCACGAGCGTTCGACTCGCTCCGCATCCGCCA
Downstream region at tRNA end position 
tcacccacaa
Secondary structure (Cloverleaf model)
>PL201001455	Ser	CGA
                   t      GCCA tcacccacaa
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     C - G
                     G - C          T C
                    T     C T C G C     A
      T G A        G      | | | | |     G
    G       G C C C       G A G C G     C
    G         | | |                 T T
    T       A G G G
      C T A        C     TGGATGGCGCAAGCCGTCAC
                    G   A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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