The detailed information of tRNA gene sequence


Sequence ID>PL201001458
Genome IDLR594664
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax sp. RA8 plasmid:3 [LR594664]
Start position on genome 70858
End posion on genome 70772
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
acccagatct
tRNA gene sequence 
GCCGCGATAGCCAAGAGGTCGAAGGCGCCGGATTGCAAACCCGGCGAGCATTGCTCCACG
TCGGTTCGAACCCGACTCGCGGCTCCA
Downstream region at tRNA end position 
tcaccaccac
Secondary structure (Cloverleaf model)
>PL201001458	Cys	GCA
                   t      TCCA tcaccaccac
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          C A
                    T     C A G C C     A
      A G A        A      | | | | |     G
    G       A C C G       G T C G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     CGAGCATTGCTCCAC
                    C - G
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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