The detailed information of tRNA gene sequence


Sequence ID>PL201001462
Genome IDLR594664
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax sp. RA8 plasmid:3 [LR594664]
Start position on genome 69932
End posion on genome 69857
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttccggccg
tRNA gene sequence 
GGTGCTGTAGCTCAGTCGGCAGAGTACGTCCTTCATACGGACGGGGTCGATGGATCGTTC
CCATCCAGCACCACCA
Downstream region at tRNA end position 
gacacacctg
Secondary structure (Cloverleaf model)
>PL201001462	Met	CAT
                   g      ACCA gacacacctg
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     T - A
                     G - C          C T
                    T     C T A C C     T
      T G A        A      | | | | |     G
    C       C T C G       G A T G G     C
    G       | | | +                 A T
    G       G A G T
      C A          A     GGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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