The detailed information of tRNA gene sequence


Sequence ID>PL201001485
Genome IDLR594667
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax sp. SRS16 plasmid:2 [LR594667]
Start position on genome 70808
End posion on genome 70732
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
accactcaat
tRNA gene sequence 
CGGCCTGTAGCGCAGCCTGGTAGCGCACCTGCATGGGGTGCAGGGGGTCAGAGGTTCGAA
CCCTCTCAGGCCGACCA
Downstream region at tRNA end position 
attcgcctct
Secondary structure (Cloverleaf model)
>PL201001485	Pro	GGG
                   t      ACCA attcgcctct
                     C - G
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          C A
                    T     T C T C C     A
      C G A        A      | | | | |     G
    C       C G C G       A G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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