The detailed information of tRNA gene sequence


Sequence ID>PL201001499
Genome IDLR594667
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax sp. SRS16 plasmid:2 [LR594667]
Start position on genome 66552
End posion on genome 66478
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
acccataccc
tRNA gene sequence 
GCCCCCGTAGCACAGTGGTAGTGCTCCTGCATCGTAGGCAGGCTTACGTCTGTTCGATTC
AGACCGTGGGCACCA
Downstream region at tRNA end position 
ttcctcgcgc
Secondary structure (Cloverleaf model)
>PL201001499	Thr	CGT
                   c      ACCA ttcctcgcgc
                     G - C
                     C - G
                     C - G
                     C - G
                     C   T
                     C - G
                     G - C          T T
                    T     C A G A C     A
        G A        A      | | | | |     G
      T     C A C G       G T C T G     C
      G     | | | |                 T T
      G     G T G C
        T A        T     CTTAC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       G
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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