The detailed information of tRNA gene sequence


Sequence ID>PL201001516
Genome IDLR594672
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax sp. PBL-E5 plasmid:2 [LR594672]
Start position on genome 74412
End posion on genome 74336
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ctgtcaacac
tRNA gene sequence 
GGTCGGCTAGCTCAGTCGGTTAGAGCAATCGCTTGATAAGCGATAGGTCCCCAGTTCGAG
TCTGGGGCTGACCACCA
Downstream region at tRNA end position 
acacttcggg
Secondary structure (Cloverleaf model)
>PL201001516	Ile	GAT
                   c      ACCA acacttcggg
                     G - C
                     G - C
                     T - A
                     C - G
                     G + T
                     G - C
                     C - G          T G
                    T     G G G T C     A
      T G A        A      | | | | |     G
    C       C T C G       C C C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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