The detailed information of tRNA gene sequence


Sequence ID>PL201001526
Genome IDLR594672
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax sp. PBL-E5 plasmid:2 [LR594672]
Start position on genome 70951
End posion on genome 70874
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ccaagaacac
tRNA gene sequence 
GGAGAGTTAGCTGAGTTGGTTTCAAGCGCTGGCCTCATAAGCCAGGGTACGTCGGTTCGA
ATCCGTCACTCTCTACCA
Downstream region at tRNA end position 
tcaccggccg
Secondary structure (Cloverleaf model)
>PL201001526	Ile2	CAT
                   c      ACCA tcaccggccg
                     G + T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T G C C     A
    T T G A        A      |   | | |     G
  G         G T C G       G T C G G     C
  G           | | |                 T T
  T         A A G C
    T T C          G     GGTAC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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