The detailed information of tRNA gene sequence


Sequence ID>PL201001546
Genome IDLR594672
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax sp. PBL-E5 plasmid:2 [LR594672]
Start position on genome 58416
End posion on genome 58340
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tccaagaatt
tRNA gene sequence 
CGCGGGATGGCGCAGTCGGTCAGCGCGCTGGGTTCATATCCCAGAGGTCAGAGGTTCGAG
TCCTTTTCCCGCAACCA
Downstream region at tRNA end position 
gctcggcccc
Secondary structure (Cloverleaf model)
>PL201001546	fMet	CAT
                   t      ACCA gctcggcccc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     T T T C C     A
      T G A        G      | + | | |     G
    C       C G C G       A G A G G     C
    G       | | | |                 T T
    G       G C G C
      T C A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  T       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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