The detailed information of tRNA gene sequence


Sequence ID>PL201001591
Genome IDLR594691
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax sp. WDL1 plasmid:3 [LR594691]
Start position on genome 82894
End posion on genome 82802
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
catcatcacc
tRNA gene sequence 
GGAAGACTGGCAGAGCGGTCTATTGCGCCTGGCTTGAACCCAGGTATCGAGGAATCCCCT
CGGTCGCGGGTTCGAACCCCGCGTCTTCCGCCA
Downstream region at tRNA end position 
ccctcattgt
Secondary structure (Cloverleaf model)
>PL201001591	Ser	TGA
                   c      GCCA ccctcattgt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     C - G          C A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G C G G G     C
    G       + | | |                 T T
    T       T T G C
      C T A        G     TATCGAGGAATCCCCTCGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       C
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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