The detailed information of tRNA gene sequence


Sequence ID>PL201001596
Genome IDLR594691
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax sp. WDL1 plasmid:3 [LR594691]
Start position on genome 80302
End posion on genome 80228
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctttttttcc
tRNA gene sequence 
GGTGCTGTAGCTCAGTGGAAGAGCACGTCCCTCATAAGGACGGGGCCGATGGATCGTTCC
CATCCAGCACTACCA
Downstream region at tRNA end position 
ggaacactcg
Secondary structure (Cloverleaf model)
>PL201001596	Met	CAT
                   c      ACCA ggaacactcg
                     G + T
                     G - C
                     T - A
                     G - C
                     C - G
                     T - A
                     G - C          C T
                    T     C T A C C     T
        G A        A      | | | | |     G
      T     C T C G       G A T G G     C
      G     | | | |                 A T
      G     G A G C
        A A        A     GGGCC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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