The detailed information of tRNA gene sequence


Sequence ID>PL203000170
Genome IDLR594664
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax sp. RA8 plasmid:3 [LR594664]
Start position on genome 72570
End posion on genome 72477
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
accaatagcc
tRNA gene sequence 
GGAAGACTGGCAGAGCGGCTTATTGCGCCTGGCTTGAACCCAGGTATCGAGGCTTACCCC
TCGGTCGCGGGTCCGAATCCCGCGTCTTCCTCCA
Downstream region at tRNA end position 
gccttccgtc
Secondary structure (Cloverleaf model)
>PL203000170	Ser	TGA
                   c      TCCA gccttccgtc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     C - G          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G C G G G     C
    G       + | | |                 T C
    C       T T G C
      T T A        G     TATCGAGGCTTACCCCTCGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       C
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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