The detailed information of tRNA gene sequence


Sequence ID>A213000023
Genome IDAP024597
Search identical group
Phylum/ClassThermoproteota
SpeciesStygiolobus sp. KN-1 [AP024597]
Start position on genome 2521795
End posion on genome 2521708
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ataataattt
tRNA gene sequence 
GCCGCCGTAGCTCAGACTGGTAGAGCGCCGGCCTTGTAAGCCGGTGGTCCGGGGTTCAAG
TCCCCGCGGCGGCTttc
Downstream region at tRNA end position 
ttctccctta
Secondary structure (Cloverleaf model)
>A213000023	Thr	TGT
                   t      Tttc ttctccctta
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     G C C C C     A
      A G A        A      | | | | |     A
    C       C T C G       C G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    T G T
intron: position=38, length=14 (in A-loop)
AGGGCTATCAGGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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