The detailed information of tRNA gene sequence


Sequence ID>A213000024
Genome IDAP024597
Search identical group
Phylum/ClassThermoproteota
SpeciesStygiolobus sp. KN-1 [AP024597]
Start position on genome 2505314
End posion on genome 2505217
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
taataaacaa
tRNA gene sequence 
GCGGGGGTGCCCGAGCTGGTCAAAGGGGGCGGACTCAAGATCCGCTGGCGTAGGCCTGCG
TGGGTTCGAAGCCCACCCCCCGCACgt
Downstream region at tRNA end position 
atttttacac
Secondary structure (Cloverleaf model)
>A213000024	Leu	CAA
                   a      ACgt atttttacac
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          G A
                    T     C A C C C     A
    T C G A        G      | | | | |     G
  G         G C C C       G T G G G     C
  G           | | |                 T T
  T         A G G G
    C A A          G     TGGCGTAGGCCTGC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G *
                    C A A
intron: position=38, length=13 (in A-loop)
ACGCCTCCGGGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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