The detailed information of tRNA gene sequence


Sequence ID>A216000065
Genome IDCP060531
Search identical group
Phylum/ClassThermoplasmatota
SpeciesThermoplasmatales archaeon B_DKE [CP060531]
Start position on genome 1840213
End posion on genome 1840311
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
cctgacatta
tRNA gene sequence 
CCCGGCTTAGCTCAGTTGGTAGAGCGGCGGACTGTAGATCCGCAGGTCTCTGGTTCAAAT
CCGGAAGCCGGGAtag
Downstream region at tRNA end position 
ataacttggt
Secondary structure (Cloverleaf model)
>A216000065	Tyr	GTA
                   a      Atag ataacttggt
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A          T A
                    T     A G G C C     A
      T G A        A      | | + | |     A
    T       C T C G       T C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G *
                    G T A
intron: position=38, length=26 (in A-loop)
AGGGAAGACTGGCAAAAACCGCCGTT
Intron
Comment/Decision
Genome/Seq. Info.-

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