The detailed information of tRNA gene sequence


Sequence ID>A213000030
Genome IDAP024597
Search identical group
Phylum/ClassThermoproteota
SpeciesStygiolobus sp. KN-1 [AP024597]
Start position on genome 1830172
End posion on genome 1830083
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atttttagtt
tRNA gene sequence 
GCCGGGGTGGCCGAGCGGTTAAGGCGGCGGGCCGCAGACCCGCTATTTCCGCGGGTTCAA
GTCCCGCCCCCGGCTttt
Downstream region at tRNA end position 
aaaaaattta
Secondary structure (Cloverleaf model)
>A213000030	Cys	GCA
                   t      Tttt aaaaaattta
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G C C C     A
      C G A        G      | | | | |     A
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TATTTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  C       G *
                    G C A
intron: position=38, length=15 (in A-loop)
AGATTAATAGCTGGC
Intron
Comment/Decision
Genome/Seq. Info.-

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