The detailed information of tRNA gene sequence


Sequence ID>A215000004
Genome IDCP060531
Search identical group
Phylum/ClassThermoplasmatota
SpeciesThermoplasmatales archaeon B_DKE [CP060531]
Start position on genome 1552331
End posion on genome 1552404
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ctgaatatct
tRNA gene sequence 
GGGTCTGTGGGGTAGCCTGGTATCCTTCCAGCTTCGGGAGTTGGAAACTCCGGTCCAAAT
CCGGACAGACCCACtt
Downstream region at tRNA end position 
atatatatgt
Secondary structure (Cloverleaf model)
>A215000004	Pro	CGG
                   t      ACtt atatatatgt
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     A G G C C     A
      C G A        G      | | | | |     A
    C       T G G G       T C C G G     C
    T         | | +                 T C
    G       T C C T
      G T A        T     AAAC
                    C - G
                    C - G
                    A - T
                    G + T
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.-

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