The detailed information of tRNA gene sequence


Sequence ID>A215000029
Genome IDCP065856
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHalosimplex litoreum YGH94 [CP065856]
Start position on genome 1443275
End posion on genome 1443347
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ctaccagcac
tRNA gene sequence 
GGGCCGGTGGGGTAGCTTGGTATCCTTCGGCCTTCGGGTGGCCGTAACCGCGATTCGAAT
TCGCGCCGGCCCAtct
Downstream region at tRNA end position 
ctttcctgat
Secondary structure (Cloverleaf model)
>A215000029	Pro	CGG
                   c      Atct ctttcctgat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G C G C T     A
      C G A        G      | | | | |     G
    T       T G G G       C G C G A     C
    T         | | +                 T T
    G       T C C T
      G T A        T     TAAC
                    C - G
                    G - C
                    G - C
                    C - G
                    C - G
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.-

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