The detailed information of tRNA gene sequence


Sequence ID>A241003667
Genome IDCP133597
Search identical group
Phylum/ClassThermoplasmatota
SpeciesFerroplasma sp. [CP133597]
Start position on genome 647847
End posion on genome 647937
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tattttacaT
tRNA gene sequence 
GCCGGGGTGGCTCAGTTGGAAGAGCGTCGGACTCATAATCCGAAGGCCTCGGGTTCAATC
CCCGACCCCGGCATta
Downstream region at tRNA end position 
tacttaaata
Secondary structure (Cloverleaf model)
>A241003667	Met	CAT
                   T      ATta tacttaaata
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          C T
                    T     A G C C C     A
      T G A        G      | | | | |     A
    T       C T C G       T C G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    C A T
intron: position=38, length=16 (in A-loop)
AGCCAACAGCTGAGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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