The detailed information of tRNA gene sequence


Sequence ID>A243000324
Genome IDCP031150
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHaloplanus rubicundus CBA1113 [CP031150]
Start position on genome 1009098
End posion on genome 1009170
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gttcgaccgc
tRNA gene sequence 
GGGCCGGTGGGGTAGCTTGGTATCCTTCGGCCTTCGGGTGGCCGTAACCACGATTCAAAT
TCGTGCCGGCCCAttt
Downstream region at tRNA end position 
tccccacttt
Secondary structure (Cloverleaf model)
>A243000324	Pro	CGG
                   c      Attt tccccacttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G T G C T     A
      C G A        G      | | | | |     A
    T       T G G G       C A C G A     C
    T         | | +                 T T
    G       T C C T
      G T A        T     TAAC
                    C - G
                    G - C
                    G - C
                    C - G
                    C - G
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.-

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