The detailed information of tRNA gene sequence


Sequence ID>A243000672
Genome IDCP132292
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHaloferacaceae archaeon XH8 [CP132292]
Start position on genome 1963740
End posion on genome 1963667
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ttcgacgtgc
tRNA gene sequence 
GGGCCGGTGGGGTAGCTTGGTATCCTTCGGCCTTCGGGTGGCCGTAACCGCGATTCGAAT
TCGCGCCGGCCCACtt
Downstream region at tRNA end position 
ctcccgcaat
Secondary structure (Cloverleaf model)
>A243000672	Pro	CGG
                   c      ACtt ctcccgcaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G C G C T     A
      C G A        G      | | | | |     G
    T       T G G G       C G C G A     C
    T         | | +                 T T
    G       T C C T
      G T A        T     TAAC
                    C - G
                    G - C
                    G - C
                    C - G
                    C - G
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.-

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