The detailed information of tRNA gene sequence


Sequence ID>A243000105
Genome IDAP028634
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrofollis japonicus YC29 [AP028634]
Start position on genome 1881035
End posion on genome 1881205
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gtccacggat
tRNA gene sequence 
CCCGCCGTAGCTCAGCGGCAGAGCGCCCGGCTGTAGACCGGGTGGTCCGGGGTTCGAATC
CCCGCGGCGGGACCA
Downstream region at tRNA end position 
cccaacccgg
Secondary structure (Cloverleaf model)
>A243000105	Tyr	GTA
                   t      ACCA cccaacccgg
                     C - G
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
        G A        A      | | | | |     G
      C     C T C G       C G G G G     C
      G     | | | |                 T T
      G     G A G C
        C A        G     TGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G *
                    G T A
intron: position=38, length=96 (in A-loop)
GTGGGGCTCCAGGCCCCCCGCGCGCCCAACACCCCCAGTAAGGGGGTGGGATGAGGGCGCGCCGGCCAAT
AGGAAAGGGGGCCTGGGGGAGCAGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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