The detailed information of tRNA gene sequence


Sequence ID>A243000109
Genome IDAP028634
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrofollis japonicus YC29 [AP028634]
Start position on genome 1026935
End posion on genome 1026829
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
cgtggagggc
tRNA gene sequence 
GCCGCCGTAGCTCAGCGGGCAGAGCACCGGCCTCGTAAGCCGGGGGTCCCGGGTTCAAAT
CCCGGCGGCGGCTCCA
Downstream region at tRNA end position 
aatccatcgc
Secondary structure (Cloverleaf model)
>A243000109	Thr	CGT
                   c      TCCA aatccatcgc
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    G       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    C G T
intron: position=38, length=31 (in A-loop)
AGCGCCCGCACGTGTCCGCGGGTTCCGAGGG
Intron
Comment/Decision
Genome/Seq. Info.-

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