The detailed information of tRNA gene sequence


Sequence ID>A243000208
Genome IDCP026993
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopumilus cobalaminigenes HCA1 [CP026993]
Start position on genome 1080806
End posion on genome 1080904
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
taatttagtT
tRNA gene sequence 
GGACCGGTCGTCTAGTTTGGTTTGGATGACGCACTCACACTGCGTAGGTCGTGGGTTCAA
ATCCCATCCGGTCCATta
Downstream region at tRNA end position 
catcactttg
Secondary structure (Cloverleaf model)
>A243000208	Val	CAC
                   T      ATta catcactttg
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T A C C C     A
    T T G A        C      + | | | |     A
  T         T C T G       G T G G G     C
  G         + | | +                 T T
  G         G G A T
    T T T          G     AGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
intron: position=45, length=22
AGAGAAATTACTTCTCCGCAAA
Intron
Comment/Decision
Genome/Seq. Info.-

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